Cluster: HRGMv2_2285_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2285
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2285_137 | HRGMv2_2285_137_1 | 26 | 718 | - | GT2 |
| CAZyme | HRGMv2_2285_137 | HRGMv2_2285_137_2 | 723 | 1580 | - | GT2 |
| pfam | HRGMv2_2285_137 | HRGMv2_2285_137_3 | 2163 | 3812 | + | HMGL-like | LeuA_dimer | IPMS_D2 |
| pfam | HRGMv2_2285_137 | HRGMv2_2285_137_4 | 3929 | 4189 | + | SpoVS |
| TC | HRGMv2_2285_137 | HRGMv2_2285_137_5 | 4448 | 4852 | - | 3.A.2.1.5 |
| TC | HRGMv2_2285_137 | HRGMv2_2285_137_6 | 4867 | 5658 | - | 3.A.2.1.5 |
Gene ID: HRGMv2_2285_137_1
Type: CAZyme
Location: 26 - 718 (-)
Type: CAZyme
Location: 26 - 718 (-)
Gene ID: HRGMv2_2285_137_2
Type: CAZyme
Location: 723 - 1580 (-)
Type: CAZyme
Location: 723 - 1580 (-)
Gene ID: HRGMv2_2285_137_3
Type: pfam
Location: 2163 - 3812 (+)
Type: pfam
Location: 2163 - 3812 (+)
Gene ID: HRGMv2_2285_137_4
Type: pfam
Location: 3929 - 4189 (+)
Type: pfam
Location: 3929 - 4189 (+)
Gene ID: HRGMv2_2285_137_5
Type: TC
Location: 4448 - 4852 (-)
Type: TC
Location: 4448 - 4852 (-)
Gene ID: HRGMv2_2285_137_6
Type: TC
Location: 4867 - 5658 (-)
Type: TC
Location: 4867 - 5658 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
Gallispira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.