Cluster: HRGMv2_2285_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2285
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2285_83 | HRGMv2_2285_83_2 | 1383 | 4454 | + | 2.A.6.3.6 |
| CAZyme | HRGMv2_2285_83 | HRGMv2_2285_83_3 | 4548 | 5537 | + | GH154 |
| pfam | HRGMv2_2285_83 | HRGMv2_2285_83_4 | 5626 | 6228 | - | RNase_T |
| TF | HRGMv2_2285_83 | HRGMv2_2285_83_5 | 6237 | 7142 | - | HTH_1 |
| TC | HRGMv2_2285_83 | HRGMv2_2285_83_6 | 7291 | 7680 | + | 3.B.1.1.2 |
Gene ID: HRGMv2_2285_83_2
Type: TC
Location: 1383 - 4454 (+)
Type: TC
Location: 1383 - 4454 (+)
Gene ID: HRGMv2_2285_83_3
Type: CAZyme
Location: 4548 - 5537 (+)
Type: CAZyme
Location: 4548 - 5537 (+)
Gene ID: HRGMv2_2285_83_4
Type: pfam
Location: 5626 - 6228 (-)
Type: pfam
Location: 5626 - 6228 (-)
Gene ID: HRGMv2_2285_83_5
Type: TF
Location: 6237 - 7142 (-)
Type: TF
Location: 6237 - 7142 (-)
Gene ID: HRGMv2_2285_83_6
Type: TC
Location: 7291 - 7680 (+)
Type: TC
Location: 7291 - 7680 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
Gallispira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.