Cluster: HRGMv2_2283_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2283
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2283_13 | HRGMv2_2283_13_41 | 42065 | 43855 | + | 2.A.58.2.2 |
| pfam | HRGMv2_2283_13 | HRGMv2_2283_13_42 | 43915 | 44883 | - | ABC_sub_bind |
| pfam | HRGMv2_2283_13 | HRGMv2_2283_13_43 | 45180 | 46004 | + | CN_hydrolase |
| TC | HRGMv2_2283_13 | HRGMv2_2283_13_44 | 46017 | 47054 | - | 4.D.2.1.5 |
| CAZyme | HRGMv2_2283_13 | HRGMv2_2283_13_45 | 47014 | 47658 | - | CE4 |
| CAZyme | HRGMv2_2283_13 | HRGMv2_2283_13_46 | 47633 | 48748 | - | GT28 |
Gene ID: HRGMv2_2283_13_41
Type: TC
Location: 42065 - 43855 (+)
Type: TC
Location: 42065 - 43855 (+)
Gene ID: HRGMv2_2283_13_42
Type: pfam
Location: 43915 - 44883 (-)
Type: pfam
Location: 43915 - 44883 (-)
Gene ID: HRGMv2_2283_13_43
Type: pfam
Location: 45180 - 46004 (+)
Type: pfam
Location: 45180 - 46004 (+)
Gene ID: HRGMv2_2283_13_44
Type: TC
Location: 46017 - 47054 (-)
Type: TC
Location: 46017 - 47054 (-)
Gene ID: HRGMv2_2283_13_45
Type: CAZyme
Location: 47014 - 47658 (-)
Type: CAZyme
Location: 47014 - 47658 (-)
Gene ID: HRGMv2_2283_13_46
Type: CAZyme
Location: 47633 - 48748 (-)
Type: CAZyme
Location: 47633 - 48748 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp902471845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.