Cluster: HRGMv2_2283_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2283
- CGC Family ID: CGCFAM_10016
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2283_9 | HRGMv2_2283_9_58 | 65026 | 66315 | + | 2.A.1.24.4 |
| CAZyme | HRGMv2_2283_9 | HRGMv2_2283_9_59 | 66411 | 67457 | + | GT2 |
| pfam | HRGMv2_2283_9 | HRGMv2_2283_9_60 | 67637 | 67942 | + | Trns_repr_metal |
| TC | HRGMv2_2283_9 | HRGMv2_2283_9_61 | 67964 | 70576 | + | 3.A.3.5.15 |
| STP | HRGMv2_2283_9 | HRGMv2_2283_9_62 | 70626 | 70823 | + | HMA |
| TC | HRGMv2_2283_9 | HRGMv2_2283_9_63 | 70989 | 71678 | + | 1.A.33.1.5 |
Gene ID: HRGMv2_2283_9_58
Type: TC
Location: 65026 - 66315 (+)
Type: TC
Location: 65026 - 66315 (+)
Gene ID: HRGMv2_2283_9_59
Type: CAZyme
Location: 66411 - 67457 (+)
Type: CAZyme
Location: 66411 - 67457 (+)
Gene ID: HRGMv2_2283_9_60
Type: pfam
Location: 67637 - 67942 (+)
Type: pfam
Location: 67637 - 67942 (+)
Gene ID: HRGMv2_2283_9_61
Type: TC
Location: 67964 - 70576 (+)
Type: TC
Location: 67964 - 70576 (+)
Gene ID: HRGMv2_2283_9_62
Type: STP
Location: 70626 - 70823 (+)
Type: STP
Location: 70626 - 70823 (+)
Gene ID: HRGMv2_2283_9_63
Type: TC
Location: 70989 - 71678 (+)
Type: TC
Location: 70989 - 71678 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp902471845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.