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Cluster: HRGMv2_2283_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2283_6 HRGMv2_2283_6_66 70059 70226 - 1.E.52.1.1
NULL(UNKNOWN) HRGMv2_2283_6 HRGMv2_2283_6_67 70238 71452 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2283_6 HRGMv2_2283_6_68 71458 72207 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2283_6 HRGMv2_2283_6_69 72204 73493 - 3.A.7.15.1
NULL(UNKNOWN) HRGMv2_2283_6 HRGMv2_2283_6_70 73505 74374 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2283_6 HRGMv2_2283_6_71 74618 74911 - BofA
CAZyme HRGMv2_2283_6 HRGMv2_2283_6_72 74983 77019 - CBM48 | GH13_9
CAZyme HRGMv2_2283_6 HRGMv2_2283_6_73 77029 78375 - GH13_20
Gene ID: HRGMv2_2283_6_66
Type: TC
Location: 70059 - 70226 (-)
Gene ID: HRGMv2_2283_6_67
Type:
Location: 70238 - 71452 (-)
Gene ID: HRGMv2_2283_6_68
Type:
Location: 71458 - 72207 (-)
Gene ID: HRGMv2_2283_6_69
Type: TC
Location: 72204 - 73493 (-)
Gene ID: HRGMv2_2283_6_70
Type:
Location: 73505 - 74374 (-)
Gene ID: HRGMv2_2283_6_71
Type: pfam
Location: 74618 - 74911 (-)
Gene ID: HRGMv2_2283_6_72
Type: CAZyme
Location: 74983 - 77019 (-)
Gene ID: HRGMv2_2283_6_73
Type: CAZyme
Location: 77029 - 78375 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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