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Cluster: HRGMv2_2283_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2283_6 HRGMv2_2283_6_28 30092 31153 - 3.A.1.17.6
TC HRGMv2_2283_6 HRGMv2_2283_6_29 31150 31893 - 3.A.1.17.8
TC HRGMv2_2283_6 HRGMv2_2283_6_30 31895 32644 - 3.A.1.17.8
pfam HRGMv2_2283_6 HRGMv2_2283_6_31 32648 33310 - TENA_THI-4
CAZyme HRGMv2_2283_6 HRGMv2_2283_6_32 33467 34441 - GT2
pfam HRGMv2_2283_6 HRGMv2_2283_6_33 34458 34928 - MoaC
TC HRGMv2_2283_6 HRGMv2_2283_6_34 35022 35711 + 9.B.120.1.3
Gene ID: HRGMv2_2283_6_28
Type: TC
Location: 30092 - 31153 (-)
Gene ID: HRGMv2_2283_6_29
Type: TC
Location: 31150 - 31893 (-)
Gene ID: HRGMv2_2283_6_30
Type: TC
Location: 31895 - 32644 (-)
Gene ID: HRGMv2_2283_6_31
Type: pfam
Location: 32648 - 33310 (-)
Gene ID: HRGMv2_2283_6_32
Type: CAZyme
Location: 33467 - 34441 (-)
Gene ID: HRGMv2_2283_6_33
Type: pfam
Location: 34458 - 34928 (-)
Gene ID: HRGMv2_2283_6_34
Type: TC
Location: 35022 - 35711 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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