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Cluster: HRGMv2_2283_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2283_3 HRGMv2_2283_3_63 68197 69453 - GT2
pfam HRGMv2_2283_3 HRGMv2_2283_3_64 69696 70946 + DUF1015
TC HRGMv2_2283_3 HRGMv2_2283_3_65 71116 71844 - 3.A.1.12.3
TC HRGMv2_2283_3 HRGMv2_2283_3_66 71860 72840 - 3.A.1.12.3
TC HRGMv2_2283_3 HRGMv2_2283_3_67 72842 73486 - 3.A.1.12.8
TC HRGMv2_2283_3 HRGMv2_2283_3_68 73504 74571 - 3.A.1.11.7
TC HRGMv2_2283_3 HRGMv2_2283_3_69 74585 75367 - 3.A.1.11.2
TC HRGMv2_2283_3 HRGMv2_2283_3_70 75361 76179 - 3.A.1.11.8
TC HRGMv2_2283_3 HRGMv2_2283_3_71 76172 76726 - 3.A.1.11.8
TC HRGMv2_2283_3 HRGMv2_2283_3_72 76841 77248 - 3.A.1.11.8
Gene ID: HRGMv2_2283_3_63
Type: CAZyme
Location: 68197 - 69453 (-)
Gene ID: HRGMv2_2283_3_64
Type: pfam
Location: 69696 - 70946 (+)
Gene ID: HRGMv2_2283_3_65
Type: TC
Location: 71116 - 71844 (-)
Gene ID: HRGMv2_2283_3_66
Type: TC
Location: 71860 - 72840 (-)
Gene ID: HRGMv2_2283_3_67
Type: TC
Location: 72842 - 73486 (-)
Gene ID: HRGMv2_2283_3_68
Type: TC
Location: 73504 - 74571 (-)
Gene ID: HRGMv2_2283_3_69
Type: TC
Location: 74585 - 75367 (-)
Gene ID: HRGMv2_2283_3_70
Type: TC
Location: 75361 - 76179 (-)
Gene ID: HRGMv2_2283_3_71
Type: TC
Location: 76172 - 76726 (-)
Gene ID: HRGMv2_2283_3_72
Type: TC
Location: 76841 - 77248 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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