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Cluster: HRGMv2_2283_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2283_50 HRGMv2_2283_50_5 6028 7098 - 9.A.23.1.1
TF HRGMv2_2283_50 HRGMv2_2283_50_6 7114 7722 - HTH_11
NULL(UNKNOWN) HRGMv2_2283_50 HRGMv2_2283_50_7 7786 8058 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2283_50 HRGMv2_2283_50_8 8065 8985 + 2.A.19.5.2
CAZyme HRGMv2_2283_50 HRGMv2_2283_50_9 9102 9809 + CE4
TC HRGMv2_2283_50 HRGMv2_2283_50_10 9813 11252 - 2.A.38.1.1
TC HRGMv2_2283_50 HRGMv2_2283_50_11 11255 12553 - 2.A.38.1.1
Gene ID: HRGMv2_2283_50_5
Type: TC
Location: 6028 - 7098 (-)
Gene ID: HRGMv2_2283_50_6
Type: TF
Location: 7114 - 7722 (-)
Gene ID: HRGMv2_2283_50_7
Type:
Location: 7786 - 8058 (+)
Gene ID: HRGMv2_2283_50_8
Type: TC
Location: 8065 - 8985 (+)
Gene ID: HRGMv2_2283_50_9
Type: CAZyme
Location: 9102 - 9809 (+)
Gene ID: HRGMv2_2283_50_10
Type: TC
Location: 9813 - 11252 (-)
Gene ID: HRGMv2_2283_50_11
Type: TC
Location: 11255 - 12553 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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