Cluster: HRGMv2_2283_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2283
- CGC Family ID: CGCFAM_02615
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2283_42 | HRGMv2_2283_42_16 | 16120 | 16884 | + | 3.A.1.134.4 |
| TC | HRGMv2_2283_42 | HRGMv2_2283_42_17 | 16881 | 18938 | + | 3.A.1.134.9 |
| CAZyme | HRGMv2_2283_42 | HRGMv2_2283_42_18 | 19038 | 19634 | - | CE4 |
Gene ID: HRGMv2_2283_42_16
Type: TC
Location: 16120 - 16884 (+)
Type: TC
Location: 16120 - 16884 (+)
Gene ID: HRGMv2_2283_42_17
Type: TC
Location: 16881 - 18938 (+)
Type: TC
Location: 16881 - 18938 (+)
Gene ID: HRGMv2_2283_42_18
Type: CAZyme
Location: 19038 - 19634 (-)
Type: CAZyme
Location: 19038 - 19634 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp902471845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.