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Cluster: HRGMv2_2283_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2283_36 HRGMv2_2283_36_1 1 711 - 3.A.1.121.4
STP HRGMv2_2283_36 HRGMv2_2283_36_2 806 1639 - Fer4
pfam HRGMv2_2283_36 HRGMv2_2283_36_3 1744 2565 + Lactamase_B
TC HRGMv2_2283_36 HRGMv2_2283_36_4 2665 4047 + 2.A.40.7.6
TC HRGMv2_2283_36 HRGMv2_2283_36_5 4069 5919 + 3.A.1.120.6
pfam HRGMv2_2283_36 HRGMv2_2283_36_6 6070 6423 + YgbA_NO
TC HRGMv2_2283_36 HRGMv2_2283_36_7 6420 8156 + 3.A.1.106.12
TC HRGMv2_2283_36 HRGMv2_2283_36_8 8153 9877 + 3.A.1.106.11
CAZyme HRGMv2_2283_36 HRGMv2_2283_36_9 9971 11803 + GH13_11
Gene ID: HRGMv2_2283_36_1
Type: TC
Location: 1 - 711 (-)
Gene ID: HRGMv2_2283_36_2
Type: STP
Location: 806 - 1639 (-)
Gene ID: HRGMv2_2283_36_3
Type: pfam
Location: 1744 - 2565 (+)
Gene ID: HRGMv2_2283_36_4
Type: TC
Location: 2665 - 4047 (+)
Gene ID: HRGMv2_2283_36_5
Type: TC
Location: 4069 - 5919 (+)
Gene ID: HRGMv2_2283_36_6
Type: pfam
Location: 6070 - 6423 (+)
Gene ID: HRGMv2_2283_36_7
Type: TC
Location: 6420 - 8156 (+)
Gene ID: HRGMv2_2283_36_8
Type: TC
Location: 8153 - 9877 (+)
Gene ID: HRGMv2_2283_36_9
Type: CAZyme
Location: 9971 - 11803 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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