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Cluster: HRGMv2_2283_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2283_22 HRGMv2_2283_22_7 4760 6448 + GH18
TC HRGMv2_2283_22 HRGMv2_2283_22_8 7370 8623 - 3.A.1.122.2
NULL(UNKNOWN) HRGMv2_2283_22 HRGMv2_2283_22_9 8638 10215 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2283_22 HRGMv2_2283_22_10 10187 10894 - 3.A.1.122.2
pfam HRGMv2_2283_22 HRGMv2_2283_22_11 10891 12117 - Biotin_lipoyl_2
pfam HRGMv2_2283_22 HRGMv2_2283_22_12 12626 15781 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
CAZyme HRGMv2_2283_22 HRGMv2_2283_22_13 15809 18304 + GT35
STP HRGMv2_2283_22 HRGMv2_2283_22_14 18361 19269 - HATPase_c | HisKA
pfam HRGMv2_2283_22 HRGMv2_2283_22_15 19285 20109 - ABC2_membrane_2
TC HRGMv2_2283_22 HRGMv2_2283_22_16 20102 21016 - 3.A.1.131.1
Gene ID: HRGMv2_2283_22_7
Type: CAZyme
Location: 4760 - 6448 (+)
Gene ID: HRGMv2_2283_22_8
Type: TC
Location: 7370 - 8623 (-)
Gene ID: HRGMv2_2283_22_9
Type:
Location: 8638 - 10215 (-)
Gene ID: HRGMv2_2283_22_10
Type: TC
Location: 10187 - 10894 (-)
Gene ID: HRGMv2_2283_22_11
Type: pfam
Location: 10891 - 12117 (-)
Gene ID: HRGMv2_2283_22_12
Type: pfam
Location: 12626 - 15781 (+)
Gene ID: HRGMv2_2283_22_13
Type: CAZyme
Location: 15809 - 18304 (+)
Gene ID: HRGMv2_2283_22_14
Type: STP
Location: 18361 - 19269 (-)
Gene ID: HRGMv2_2283_22_15
Type: pfam
Location: 19285 - 20109 (-)
Gene ID: HRGMv2_2283_22_16
Type: TC
Location: 20102 - 21016 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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