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Cluster: HRGMv2_2283_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2283_14 HRGMv2_2283_14_24 32883 33647 - 3.A.1.5.32
TC HRGMv2_2283_14 HRGMv2_2283_14_25 33640 34647 - 3.A.1.5.2
TC HRGMv2_2283_14 HRGMv2_2283_14_26 34649 35500 - 3.A.1.5.11
TC HRGMv2_2283_14 HRGMv2_2283_14_27 35500 36447 - 3.A.1.5.11
TC HRGMv2_2283_14 HRGMv2_2283_14_28 36469 38064 - 3.A.1.5.17
pfam HRGMv2_2283_14 HRGMv2_2283_14_29 38286 39236 - EamA | EamA
CAZyme HRGMv2_2283_14 HRGMv2_2283_14_30 39233 40669 - GT5
Gene ID: HRGMv2_2283_14_24
Type: TC
Location: 32883 - 33647 (-)
Gene ID: HRGMv2_2283_14_25
Type: TC
Location: 33640 - 34647 (-)
Gene ID: HRGMv2_2283_14_26
Type: TC
Location: 34649 - 35500 (-)
Gene ID: HRGMv2_2283_14_27
Type: TC
Location: 35500 - 36447 (-)
Gene ID: HRGMv2_2283_14_28
Type: TC
Location: 36469 - 38064 (-)
Gene ID: HRGMv2_2283_14_29
Type: pfam
Location: 38286 - 39236 (-)
Gene ID: HRGMv2_2283_14_30
Type: CAZyme
Location: 39233 - 40669 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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