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Cluster: HRGMv2_2281_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2281_7 HRGMv2_2281_7_36 41505 43295 + 9.B.27.1.1
TC HRGMv2_2281_7 HRGMv2_2281_7_37 43332 44030 + 9.B.27.1.2
CAZyme HRGMv2_2281_7 HRGMv2_2281_7_38 44051 45385 + GT2
pfam HRGMv2_2281_7 HRGMv2_2281_7_39 45419 46441 + APH
STP HRGMv2_2281_7 HRGMv2_2281_7_40 46758 47657 + Rhodanese | Rhodanese
TC HRGMv2_2281_7 HRGMv2_2281_7_41 47670 48941 + 3.A.1.19.4
pfam HRGMv2_2281_7 HRGMv2_2281_7_42 48941 49828 + BPD_transp_1
pfam HRGMv2_2281_7 HRGMv2_2281_7_43 49825 50628 + BPD_transp_1
TC HRGMv2_2281_7 HRGMv2_2281_7_44 50621 51655 + 3.A.1.20.2
Gene ID: HRGMv2_2281_7_36
Type: TC
Location: 41505 - 43295 (+)
Gene ID: HRGMv2_2281_7_37
Type: TC
Location: 43332 - 44030 (+)
Gene ID: HRGMv2_2281_7_38
Type: CAZyme
Location: 44051 - 45385 (+)
Gene ID: HRGMv2_2281_7_39
Type: pfam
Location: 45419 - 46441 (+)
Gene ID: HRGMv2_2281_7_40
Type: STP
Location: 46758 - 47657 (+)
Gene ID: HRGMv2_2281_7_41
Type: TC
Location: 47670 - 48941 (+)
Gene ID: HRGMv2_2281_7_42
Type: pfam
Location: 48941 - 49828 (+)
Gene ID: HRGMv2_2281_7_43
Type: pfam
Location: 49825 - 50628 (+)
Gene ID: HRGMv2_2281_7_44
Type: TC
Location: 50621 - 51655 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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