Cluster: HRGMv2_2281_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2281
- CGC Family ID: CGCFAM_08023
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2281_5 | HRGMv2_2281_5_9 | 4364 | 5722 | + | 2.A.38.1.1 |
| TC | HRGMv2_2281_5 | HRGMv2_2281_5_10 | 5735 | 7174 | + | 2.A.38.1.1 |
| STP | HRGMv2_2281_5 | HRGMv2_2281_5_11 | 7257 | 7682 | - | CBS | CBS |
| pfam | HRGMv2_2281_5 | HRGMv2_2281_5_12 | 7739 | 8344 | - | LUD_dom |
| CAZyme | HRGMv2_2281_5 | HRGMv2_2281_5_13 | 8433 | 10082 | - | GH13_29 |
| TC | HRGMv2_2281_5 | HRGMv2_2281_5_14 | 10145 | 11761 | - | 4.A.1.2.13 |
Gene ID: HRGMv2_2281_5_9
Type: TC
Location: 4364 - 5722 (+)
Type: TC
Location: 4364 - 5722 (+)
Gene ID: HRGMv2_2281_5_10
Type: TC
Location: 5735 - 7174 (+)
Type: TC
Location: 5735 - 7174 (+)
Gene ID: HRGMv2_2281_5_11
Type: STP
Location: 7257 - 7682 (-)
Type: STP
Location: 7257 - 7682 (-)
Gene ID: HRGMv2_2281_5_12
Type: pfam
Location: 7739 - 8344 (-)
Type: pfam
Location: 7739 - 8344 (-)
Gene ID: HRGMv2_2281_5_13
Type: CAZyme
Location: 8433 - 10082 (-)
Type: CAZyme
Location: 8433 - 10082 (-)
Gene ID: HRGMv2_2281_5_14
Type: TC
Location: 10145 - 11761 (-)
Type: TC
Location: 10145 - 11761 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp958442925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.