Cluster: HRGMv2_2281_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2281
- CGC Family ID: CGCFAM_08025
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2281_4 | HRGMv2_2281_4_10 | 6949 | 7644 | - | 9.B.120.1.4 |
| STP | HRGMv2_2281_4 | HRGMv2_2281_4_11 | 7641 | 8165 | - | NUDIX |
| pfam | HRGMv2_2281_4 | HRGMv2_2281_4_12 | 8214 | 9686 | - | Metallophos | CNP_C_terminal |
| TC | HRGMv2_2281_4 | HRGMv2_2281_4_13 | 9729 | 10880 | - | 2.A.4.1.3 |
| pfam | HRGMv2_2281_4 | HRGMv2_2281_4_14 | 10877 | 11908 | - | GIY-YIG | H2O2_YaaD |
| pfam | HRGMv2_2281_4 | HRGMv2_2281_4_15 | 12140 | 13996 | - | AAA_15 | AAA_15 | AAA_21 | AAA_23 |
| CAZyme | HRGMv2_2281_4 | HRGMv2_2281_4_16 | 14074 | 15633 | - | CBM50 |
Gene ID: HRGMv2_2281_4_10
Type: TC
Location: 6949 - 7644 (-)
Type: TC
Location: 6949 - 7644 (-)
Gene ID: HRGMv2_2281_4_11
Type: STP
Location: 7641 - 8165 (-)
Type: STP
Location: 7641 - 8165 (-)
Gene ID: HRGMv2_2281_4_12
Type: pfam
Location: 8214 - 9686 (-)
Type: pfam
Location: 8214 - 9686 (-)
Gene ID: HRGMv2_2281_4_13
Type: TC
Location: 9729 - 10880 (-)
Type: TC
Location: 9729 - 10880 (-)
Gene ID: HRGMv2_2281_4_14
Type: pfam
Location: 10877 - 11908 (-)
Type: pfam
Location: 10877 - 11908 (-)
Gene ID: HRGMv2_2281_4_15
Type: pfam
Location: 12140 - 13996 (-)
Type: pfam
Location: 12140 - 13996 (-)
Gene ID: HRGMv2_2281_4_16
Type: CAZyme
Location: 14074 - 15633 (-)
Type: CAZyme
Location: 14074 - 15633 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp958442925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.