Cluster: HRGMv2_2281_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2281
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2281_33 | HRGMv2_2281_33_8 | 5218 | 6099 | - | CE4 |
| CAZyme | HRGMv2_2281_33 | HRGMv2_2281_33_9 | 6100 | 7005 | - | CE4 |
| TC | HRGMv2_2281_33 | HRGMv2_2281_33_10 | 7385 | 8263 | + | 3.A.1.3.15 |
| TC | HRGMv2_2281_33 | HRGMv2_2281_33_11 | 8401 | 9069 | + | 3.A.1.3.15 |
| TC | HRGMv2_2281_33 | HRGMv2_2281_33_12 | 9053 | 9775 | + | 3.A.1.3.15 |
Gene ID: HRGMv2_2281_33_8
Type: CAZyme
Location: 5218 - 6099 (-)
Type: CAZyme
Location: 5218 - 6099 (-)
Gene ID: HRGMv2_2281_33_9
Type: CAZyme
Location: 6100 - 7005 (-)
Type: CAZyme
Location: 6100 - 7005 (-)
Gene ID: HRGMv2_2281_33_10
Type: TC
Location: 7385 - 8263 (+)
Type: TC
Location: 7385 - 8263 (+)
Gene ID: HRGMv2_2281_33_11
Type: TC
Location: 8401 - 9069 (+)
Type: TC
Location: 8401 - 9069 (+)
Gene ID: HRGMv2_2281_33_12
Type: TC
Location: 9053 - 9775 (+)
Type: TC
Location: 9053 - 9775 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp958442925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.