Cluster: HRGMv2_2281_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2281
- CGC Family ID: CGCFAM_00015
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2281_23 | HRGMv2_2281_23_21 | 21662 | 23179 | - | 2.A.66.1.40 |
| pfam | HRGMv2_2281_23 | HRGMv2_2281_23_22 | 23207 | 24400 | - | Wzy_C |
| CAZyme | HRGMv2_2281_23 | HRGMv2_2281_23_23 | 24439 | 25425 | - | GT2 |
| CAZyme | HRGMv2_2281_23 | HRGMv2_2281_23_24 | 25432 | 26484 | - | GT2 |
Gene ID: HRGMv2_2281_23_21
Type: TC
Location: 21662 - 23179 (-)
Type: TC
Location: 21662 - 23179 (-)
Gene ID: HRGMv2_2281_23_22
Type: pfam
Location: 23207 - 24400 (-)
Type: pfam
Location: 23207 - 24400 (-)
Gene ID: HRGMv2_2281_23_23
Type: CAZyme
Location: 24439 - 25425 (-)
Type: CAZyme
Location: 24439 - 25425 (-)
Gene ID: HRGMv2_2281_23_24
Type: CAZyme
Location: 25432 - 26484 (-)
Type: CAZyme
Location: 25432 - 26484 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp958442925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.