Cluster: HRGMv2_2281_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2281
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2281_20 | HRGMv2_2281_20_3 | 1820 | 8380 | - | CBM32 | GH2 |
| pfam | HRGMv2_2281_20 | HRGMv2_2281_20_4 | 8825 | 9769 | - | 2-Hacid_dh | 2-Hacid_dh_C |
| pfam | HRGMv2_2281_20 | HRGMv2_2281_20_5 | 9931 | 11283 | - | ELFV_dehydrog | ELFV_dehydrog_N |
| TC | HRGMv2_2281_20 | HRGMv2_2281_20_6 | 11624 | 12811 | - | 2.A.27.1.1 |
Gene ID: HRGMv2_2281_20_3
Type: CAZyme
Location: 1820 - 8380 (-)
Type: CAZyme
Location: 1820 - 8380 (-)
Gene ID: HRGMv2_2281_20_4
Type: pfam
Location: 8825 - 9769 (-)
Type: pfam
Location: 8825 - 9769 (-)
Gene ID: HRGMv2_2281_20_5
Type: pfam
Location: 9931 - 11283 (-)
Type: pfam
Location: 9931 - 11283 (-)
Gene ID: HRGMv2_2281_20_6
Type: TC
Location: 11624 - 12811 (-)
Type: TC
Location: 11624 - 12811 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp958442925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.