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Cluster: HRGMv2_2281_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2281_19 HRGMv2_2281_19_7 5228 6820 + GH25
TC HRGMv2_2281_19 HRGMv2_2281_19_8 6911 8254 - 9.A.40.2.2
TC HRGMv2_2281_19 HRGMv2_2281_19_9 8660 10642 + 3.A.10.1.5
TF HRGMv2_2281_19 HRGMv2_2281_19_10 10715 11437 - GntR
TC HRGMv2_2281_19 HRGMv2_2281_19_11 11635 13083 + 4.A.1.1.2
pfam HRGMv2_2281_19 HRGMv2_2281_19_12 13083 13832 + YdjC
CAZyme HRGMv2_2281_19 HRGMv2_2281_19_13 13861 15549 + GH13_29
Gene ID: HRGMv2_2281_19_7
Type: CAZyme
Location: 5228 - 6820 (+)
Gene ID: HRGMv2_2281_19_8
Type: TC
Location: 6911 - 8254 (-)
Gene ID: HRGMv2_2281_19_9
Type: TC
Location: 8660 - 10642 (+)
Gene ID: HRGMv2_2281_19_10
Type: TF
Location: 10715 - 11437 (-)
Gene ID: HRGMv2_2281_19_11
Type: TC
Location: 11635 - 13083 (+)
Gene ID: HRGMv2_2281_19_12
Type: pfam
Location: 13083 - 13832 (+)
Gene ID: HRGMv2_2281_19_13
Type: CAZyme
Location: 13861 - 15549 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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