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Cluster: HRGMv2_2281_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2281_18 HRGMv2_2281_18_33 34933 35862 + 3.A.1.5.29
TC HRGMv2_2281_18 HRGMv2_2281_18_34 35855 36661 + 3.A.1.5.18
pfam HRGMv2_2281_18 HRGMv2_2281_18_35 36730 37095 + CMD
pfam HRGMv2_2281_18 HRGMv2_2281_18_36 37098 37538 + OsmC
TC HRGMv2_2281_18 HRGMv2_2281_18_37 37579 39201 + 3.A.1.5.27
TC HRGMv2_2281_18 HRGMv2_2281_18_38 39335 40282 + 3.A.1.5.11
TC HRGMv2_2281_18 HRGMv2_2281_18_39 40284 41201 + 3.A.1.5.11
pfam HRGMv2_2281_18 HRGMv2_2281_18_40 41525 42055 + NusG
STP HRGMv2_2281_18 HRGMv2_2281_18_41 42096 43298 + Aminotran_1_2
TC HRGMv2_2281_18 HRGMv2_2281_18_42 43340 44086 + 9.B.18.1.3
CAZyme HRGMv2_2281_18 HRGMv2_2281_18_43 44118 45353 + GT4
pfam HRGMv2_2281_18 HRGMv2_2281_18_44 45350 46669 + UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam HRGMv2_2281_18 HRGMv2_2281_18_45 46722 47807 + Epimerase_2
CAZyme HRGMv2_2281_18 HRGMv2_2281_18_46 47831 48904 + GH177
Gene ID: HRGMv2_2281_18_33
Type: TC
Location: 34933 - 35862 (+)
Gene ID: HRGMv2_2281_18_34
Type: TC
Location: 35855 - 36661 (+)
Gene ID: HRGMv2_2281_18_35
Type: pfam
Location: 36730 - 37095 (+)
Gene ID: HRGMv2_2281_18_36
Type: pfam
Location: 37098 - 37538 (+)
Gene ID: HRGMv2_2281_18_37
Type: TC
Location: 37579 - 39201 (+)
Gene ID: HRGMv2_2281_18_38
Type: TC
Location: 39335 - 40282 (+)
Gene ID: HRGMv2_2281_18_39
Type: TC
Location: 40284 - 41201 (+)
Gene ID: HRGMv2_2281_18_40
Type: pfam
Location: 41525 - 42055 (+)
Gene ID: HRGMv2_2281_18_41
Type: STP
Location: 42096 - 43298 (+)
Gene ID: HRGMv2_2281_18_42
Type: TC
Location: 43340 - 44086 (+)
Gene ID: HRGMv2_2281_18_43
Type: CAZyme
Location: 44118 - 45353 (+)
Gene ID: HRGMv2_2281_18_44
Type: pfam
Location: 45350 - 46669 (+)
Gene ID: HRGMv2_2281_18_45
Type: pfam
Location: 46722 - 47807 (+)
Gene ID: HRGMv2_2281_18_46
Type: CAZyme
Location: 47831 - 48904 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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