Cluster: HRGMv2_2281_CGC14
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2281
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2281_16 | HRGMv2_2281_16_26 | 28199 | 29596 | + | 2.A.40.2.1 |
| TC | HRGMv2_2281_16 | HRGMv2_2281_16_27 | 29844 | 30761 | + | 2.A.27.2.1 |
| peptidase | HRGMv2_2281_16 | HRGMv2_2281_16_28 | 31117 | 32265 | + | M38.UNW |
| NULL(UNKNOWN) | HRGMv2_2281_16 | HRGMv2_2281_16_29 | 32706 | 33563 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2281_16 | HRGMv2_2281_16_30 | 33647 | 34498 | + | CE4 |
| STP | HRGMv2_2281_16 | HRGMv2_2281_16_31 | 34704 | 35510 | + | Response_reg | Spo0A_C |
| CAZyme | HRGMv2_2281_16 | HRGMv2_2281_16_32 | 35629 | 37074 | + | GT5 |
| pfam | HRGMv2_2281_16 | HRGMv2_2281_16_33 | 37105 | 37563 | + | DUF212 |
| pfam | HRGMv2_2281_16 | HRGMv2_2281_16_34 | 37670 | 38368 | - | NMN_transporter |
| TC | HRGMv2_2281_16 | HRGMv2_2281_16_35 | 38439 | 39812 | - | 2.A.66.1.32 |
| STP | HRGMv2_2281_16 | HRGMv2_2281_16_36 | 39802 | 40434 | - | TetR_N |
| TC | HRGMv2_2281_16 | HRGMv2_2281_16_37 | 40734 | 41915 | - | 2.A.27.1.1 |
Gene ID: HRGMv2_2281_16_26
Type: TC
Location: 28199 - 29596 (+)
Type: TC
Location: 28199 - 29596 (+)
Gene ID: HRGMv2_2281_16_27
Type: TC
Location: 29844 - 30761 (+)
Type: TC
Location: 29844 - 30761 (+)
Gene ID: HRGMv2_2281_16_28
Type: peptidase
Location: 31117 - 32265 (+)
Type: peptidase
Location: 31117 - 32265 (+)
Gene ID: HRGMv2_2281_16_29
Type:
Location: 32706 - 33563 (+)
Type:
Location: 32706 - 33563 (+)
Gene ID: HRGMv2_2281_16_30
Type: CAZyme
Location: 33647 - 34498 (+)
Type: CAZyme
Location: 33647 - 34498 (+)
Gene ID: HRGMv2_2281_16_31
Type: STP
Location: 34704 - 35510 (+)
Type: STP
Location: 34704 - 35510 (+)
Gene ID: HRGMv2_2281_16_32
Type: CAZyme
Location: 35629 - 37074 (+)
Type: CAZyme
Location: 35629 - 37074 (+)
Gene ID: HRGMv2_2281_16_33
Type: pfam
Location: 37105 - 37563 (+)
Type: pfam
Location: 37105 - 37563 (+)
Gene ID: HRGMv2_2281_16_34
Type: pfam
Location: 37670 - 38368 (-)
Type: pfam
Location: 37670 - 38368 (-)
Gene ID: HRGMv2_2281_16_35
Type: TC
Location: 38439 - 39812 (-)
Type: TC
Location: 38439 - 39812 (-)
Gene ID: HRGMv2_2281_16_36
Type: STP
Location: 39802 - 40434 (-)
Type: STP
Location: 39802 - 40434 (-)
Gene ID: HRGMv2_2281_16_37
Type: TC
Location: 40734 - 41915 (-)
Type: TC
Location: 40734 - 41915 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp958442925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.