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Cluster: HRGMv2_2281_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2281_14 HRGMv2_2281_14_22 24419 25183 - 3.A.1.103.1
TC HRGMv2_2281_14 HRGMv2_2281_14_23 25205 25993 - 3.A.1.103.4
CAZyme HRGMv2_2281_14 HRGMv2_2281_14_24 25995 27836 - GT2
CAZyme HRGMv2_2281_14 HRGMv2_2281_14_25 27871 28920 - GT2
TC HRGMv2_2281_14 HRGMv2_2281_14_26 28905 30281 - 9.B.18.1.3
CAZyme HRGMv2_2281_14 HRGMv2_2281_14_27 30278 31186 - GT2
NULL(UNKNOWN) HRGMv2_2281_14 HRGMv2_2281_14_28 31149 31352 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2281_14 HRGMv2_2281_14_29 31377 31910 - NusG
TC HRGMv2_2281_14 HRGMv2_2281_14_30 32251 33240 - 9.B.125.2.1
Gene ID: HRGMv2_2281_14_22
Type: TC
Location: 24419 - 25183 (-)
Gene ID: HRGMv2_2281_14_23
Type: TC
Location: 25205 - 25993 (-)
Gene ID: HRGMv2_2281_14_24
Type: CAZyme
Location: 25995 - 27836 (-)
Gene ID: HRGMv2_2281_14_25
Type: CAZyme
Location: 27871 - 28920 (-)
Gene ID: HRGMv2_2281_14_26
Type: TC
Location: 28905 - 30281 (-)
Gene ID: HRGMv2_2281_14_27
Type: CAZyme
Location: 30278 - 31186 (-)
Gene ID: HRGMv2_2281_14_28
Type:
Location: 31149 - 31352 (-)
Gene ID: HRGMv2_2281_14_29
Type: pfam
Location: 31377 - 31910 (-)
Gene ID: HRGMv2_2281_14_30
Type: TC
Location: 32251 - 33240 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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