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Cluster: HRGMv2_2281_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2281_9 HRGMv2_2281_9_59 57663 58262 - 3.A.1.5.3
TC HRGMv2_2281_9 HRGMv2_2281_9_60 58252 59133 - 3.A.1.5.37
TC HRGMv2_2281_9 HRGMv2_2281_9_61 59124 61091 - 3.A.1.5.20
TC HRGMv2_2281_9 HRGMv2_2281_9_62 61113 62762 - 3.A.1.5.38
TC HRGMv2_2281_9 HRGMv2_2281_9_63 63003 63818 - 3.A.1.104.1
pfam HRGMv2_2281_9 HRGMv2_2281_9_64 63847 64401 - dTDP_sugar_isom
pfam HRGMv2_2281_9 HRGMv2_2281_9_65 64535 64897 - DUF2304
CAZyme HRGMv2_2281_9 HRGMv2_2281_9_66 64913 65605 - GT2
CAZyme HRGMv2_2281_9 HRGMv2_2281_9_67 65649 66623 - GT2
CAZyme HRGMv2_2281_9 HRGMv2_2281_9_68 66658 67479 - GT2
Gene ID: HRGMv2_2281_9_59
Type: TC
Location: 57663 - 58262 (-)
Gene ID: HRGMv2_2281_9_60
Type: TC
Location: 58252 - 59133 (-)
Gene ID: HRGMv2_2281_9_61
Type: TC
Location: 59124 - 61091 (-)
Gene ID: HRGMv2_2281_9_62
Type: TC
Location: 61113 - 62762 (-)
Gene ID: HRGMv2_2281_9_63
Type: TC
Location: 63003 - 63818 (-)
Gene ID: HRGMv2_2281_9_64
Type: pfam
Location: 63847 - 64401 (-)
Gene ID: HRGMv2_2281_9_65
Type: pfam
Location: 64535 - 64897 (-)
Gene ID: HRGMv2_2281_9_66
Type: CAZyme
Location: 64913 - 65605 (-)
Gene ID: HRGMv2_2281_9_67
Type: CAZyme
Location: 65649 - 66623 (-)
Gene ID: HRGMv2_2281_9_68
Type: CAZyme
Location: 66658 - 67479 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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