Cluster: HRGMv2_2281_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2281
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2281_2 | HRGMv2_2281_2_92 | 104893 | 106311 | - | 9.B.18.1.1 |
| pfam | HRGMv2_2281_2 | HRGMv2_2281_2_93 | 106358 | 108478 | - | LytR_cpsA_psr |
| CAZyme | HRGMv2_2281_2 | HRGMv2_2281_2_94 | 108518 | 109549 | - | GT2 |
| CAZyme | HRGMv2_2281_2 | HRGMv2_2281_2_95 | 109554 | 111740 | - | GT2 | GT2 |
| CAZyme | HRGMv2_2281_2 | HRGMv2_2281_2_96 | 111737 | 112753 | - | GT2 |
Gene ID: HRGMv2_2281_2_92
Type: TC
Location: 104893 - 106311 (-)
Type: TC
Location: 104893 - 106311 (-)
Gene ID: HRGMv2_2281_2_93
Type: pfam
Location: 106358 - 108478 (-)
Type: pfam
Location: 106358 - 108478 (-)
Gene ID: HRGMv2_2281_2_94
Type: CAZyme
Location: 108518 - 109549 (-)
Type: CAZyme
Location: 108518 - 109549 (-)
Gene ID: HRGMv2_2281_2_95
Type: CAZyme
Location: 109554 - 111740 (-)
Type: CAZyme
Location: 109554 - 111740 (-)
Gene ID: HRGMv2_2281_2_96
Type: CAZyme
Location: 111737 - 112753 (-)
Type: CAZyme
Location: 111737 - 112753 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp958442925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.