Cluster: HRGMv2_2279_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2279
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2279_1 | HRGMv2_2279_1_68 | 78117 | 79100 | + | 4.A.6.1.1 |
| TC | HRGMv2_2279_1 | HRGMv2_2279_1_69 | 79213 | 80025 | + | 4.A.6.1.19 |
| TC | HRGMv2_2279_1 | HRGMv2_2279_1_70 | 80022 | 80852 | + | 4.A.6.1.19 |
| CAZyme | HRGMv2_2279_1 | HRGMv2_2279_1_71 | 80877 | 82559 | + | GH13_31 |
Gene ID: HRGMv2_2279_1_68
Type: TC
Location: 78117 - 79100 (+)
Type: TC
Location: 78117 - 79100 (+)
Gene ID: HRGMv2_2279_1_69
Type: TC
Location: 79213 - 80025 (+)
Type: TC
Location: 79213 - 80025 (+)
Gene ID: HRGMv2_2279_1_70
Type: TC
Location: 80022 - 80852 (+)
Type: TC
Location: 80022 - 80852 (+)
Gene ID: HRGMv2_2279_1_71
Type: CAZyme
Location: 80877 - 82559 (+)
Type: CAZyme
Location: 80877 - 82559 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Species
Hominisplanchenecus sp905214675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2279_1_69 | vegan > omnivore | 1.61843 | 0.00711 |