Cluster: HRGMv2_2279_CGC31
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2279
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2279_83 | HRGMv2_2279_83_3 | 965 | 2419 | + | 9.B.34.1.2 |
| NULL(UNKNOWN) | HRGMv2_2279_83 | HRGMv2_2279_83_4 | 2480 | 3265 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2279_83 | HRGMv2_2279_83_5 | 3256 | 4530 | + | GT2 |
Gene ID: HRGMv2_2279_83_3
Type: TC
Location: 965 - 2419 (+)
Type: TC
Location: 965 - 2419 (+)
Gene ID: HRGMv2_2279_83_4
Type:
Location: 2480 - 3265 (+)
Type:
Location: 2480 - 3265 (+)
Gene ID: HRGMv2_2279_83_5
Type: CAZyme
Location: 3256 - 4530 (+)
Type: CAZyme
Location: 3256 - 4530 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Species
Hominisplanchenecus sp905214675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2279_83_3 | vegan > omnivore | 2.73809 | 0.04607 |
| HRGMv2_2279_83_4 | vegan > omnivore | 4.53041 | 0.01389 |
| HRGMv2_2279_83_5 | vegan > omnivore | 4.08134 | 0.04607 |