Cluster: HRGMv2_2279_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2279
- CGC Family ID: CGCFAM_05224
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2279_1 | HRGMv2_2279_1_58 | 64246 | 67362 | + | GH3 |
| pfam | HRGMv2_2279_1 | HRGMv2_2279_1_59 | 67566 | 68954 | + | Lyase_1 | ASL_C2 |
| pfam | HRGMv2_2279_1 | HRGMv2_2279_1_60 | 69079 | 70164 | + | Semialdhyde_dh | Semialdhyde_dhC |
| TC | HRGMv2_2279_1 | HRGMv2_2279_1_61 | 70379 | 71266 | + | 3.A.1.126.1 |
| NULL(UNKNOWN) | HRGMv2_2279_1 | HRGMv2_2279_1_62 | 71259 | 72032 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2279_1 | HRGMv2_2279_1_63 | 72047 | 74104 | + | 3.A.7.7.1 |
Gene ID: HRGMv2_2279_1_58
Type: CAZyme
Location: 64246 - 67362 (+)
Type: CAZyme
Location: 64246 - 67362 (+)
Gene ID: HRGMv2_2279_1_59
Type: pfam
Location: 67566 - 68954 (+)
Type: pfam
Location: 67566 - 68954 (+)
Gene ID: HRGMv2_2279_1_60
Type: pfam
Location: 69079 - 70164 (+)
Type: pfam
Location: 69079 - 70164 (+)
Gene ID: HRGMv2_2279_1_61
Type: TC
Location: 70379 - 71266 (+)
Type: TC
Location: 70379 - 71266 (+)
Gene ID: HRGMv2_2279_1_62
Type:
Location: 71259 - 72032 (+)
Type:
Location: 71259 - 72032 (+)
Gene ID: HRGMv2_2279_1_63
Type: TC
Location: 72047 - 74104 (+)
Type: TC
Location: 72047 - 74104 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Species
Hominisplanchenecus sp905214675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.