dbCAN Logo

Cluster: HRGMv2_2279_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2279_25 HRGMv2_2279_25_1 400 2130 - 3.A.1.106.2
CAZyme HRGMv2_2279_25 HRGMv2_2279_25_2 2341 7875 - CBM51 | GH2 | GH2
TF HRGMv2_2279_25 HRGMv2_2279_25_3 8466 8918 + LytTR
pfam HRGMv2_2279_25 HRGMv2_2279_25_4 8887 9639 - LGT
TC HRGMv2_2279_25 HRGMv2_2279_25_5 9690 13850 - 2.A.6.3.6
pfam HRGMv2_2279_25 HRGMv2_2279_25_6 14157 15566 + PGA_cap
TC HRGMv2_2279_25 HRGMv2_2279_25_7 15662 17506 - 3.A.1.135.5
TC HRGMv2_2279_25 HRGMv2_2279_25_8 17481 19235 - 3.A.1.135.5
Gene ID: HRGMv2_2279_25_1
Type: TC
Location: 400 - 2130 (-)
Gene ID: HRGMv2_2279_25_2
Type: CAZyme
Location: 2341 - 7875 (-)
Gene ID: HRGMv2_2279_25_3
Type: TF
Location: 8466 - 8918 (+)
Gene ID: HRGMv2_2279_25_4
Type: pfam
Location: 8887 - 9639 (-)
Gene ID: HRGMv2_2279_25_5
Type: TC
Location: 9690 - 13850 (-)
Gene ID: HRGMv2_2279_25_6
Type: pfam
Location: 14157 - 15566 (+)
Gene ID: HRGMv2_2279_25_7
Type: TC
Location: 15662 - 17506 (-)
Gene ID: HRGMv2_2279_25_8
Type: TC
Location: 17481 - 19235 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List