Cluster: HRGMv2_2279_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2279
- CGC Family ID: CGCFAM_05225
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2279_23 | HRGMv2_2279_23_1 | 416 | 6898 | + | CBM51 | GH2 |
| TC | HRGMv2_2279_23 | HRGMv2_2279_23_2 | 7103 | 8704 | + | 3.A.1.5.22 |
| pfam | HRGMv2_2279_23 | HRGMv2_2279_23_3 | 8676 | 10553 | + | His_kinase |
| STP | HRGMv2_2279_23 | HRGMv2_2279_23_4 | 10531 | 11355 | + | Response_reg |
| CAZyme | HRGMv2_2279_23 | HRGMv2_2279_23_5 | 11462 | 17452 | + | GH2 |
Gene ID: HRGMv2_2279_23_1
Type: CAZyme
Location: 416 - 6898 (+)
Type: CAZyme
Location: 416 - 6898 (+)
Gene ID: HRGMv2_2279_23_2
Type: TC
Location: 7103 - 8704 (+)
Type: TC
Location: 7103 - 8704 (+)
Gene ID: HRGMv2_2279_23_3
Type: pfam
Location: 8676 - 10553 (+)
Type: pfam
Location: 8676 - 10553 (+)
Gene ID: HRGMv2_2279_23_4
Type: STP
Location: 10531 - 11355 (+)
Type: STP
Location: 10531 - 11355 (+)
Gene ID: HRGMv2_2279_23_5
Type: CAZyme
Location: 11462 - 17452 (+)
Type: CAZyme
Location: 11462 - 17452 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Species
Hominisplanchenecus sp905214675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.