Cluster: HRGMv2_2279_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2279
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2279_22 | HRGMv2_2279_22_2 | 2444 | 3115 | + | 3.A.1.122.2 |
| TC | HRGMv2_2279_22 | HRGMv2_2279_22_3 | 3112 | 4293 | + | 3.A.1.122.2 |
| pfam | HRGMv2_2279_22 | HRGMv2_2279_22_4 | 4652 | 7021 | + | Big_3 |
| NULL(UNKNOWN) | HRGMv2_2279_22 | HRGMv2_2279_22_5 | 7048 | 7212 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2279_22 | HRGMv2_2279_22_6 | 7250 | 11842 | + | GH29 |
| pfam | HRGMv2_2279_22 | HRGMv2_2279_22_7 | 12124 | 12750 | + | NMT1_3 | NMT1_3 |
| TC | HRGMv2_2279_22 | HRGMv2_2279_22_8 | 12738 | 13043 | + | 2.A.27.1.1 |
Gene ID: HRGMv2_2279_22_2
Type: TC
Location: 2444 - 3115 (+)
Type: TC
Location: 2444 - 3115 (+)
Gene ID: HRGMv2_2279_22_3
Type: TC
Location: 3112 - 4293 (+)
Type: TC
Location: 3112 - 4293 (+)
Gene ID: HRGMv2_2279_22_4
Type: pfam
Location: 4652 - 7021 (+)
Type: pfam
Location: 4652 - 7021 (+)
Gene ID: HRGMv2_2279_22_5
Type:
Location: 7048 - 7212 (+)
Type:
Location: 7048 - 7212 (+)
Gene ID: HRGMv2_2279_22_6
Type: CAZyme
Location: 7250 - 11842 (+)
Type: CAZyme
Location: 7250 - 11842 (+)
Gene ID: HRGMv2_2279_22_7
Type: pfam
Location: 12124 - 12750 (+)
Type: pfam
Location: 12124 - 12750 (+)
Gene ID: HRGMv2_2279_22_8
Type: TC
Location: 12738 - 13043 (+)
Type: TC
Location: 12738 - 13043 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Species
Hominisplanchenecus sp905214675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.