Cluster: HRGMv2_2279_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2279
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2279_14 | HRGMv2_2279_14_47 | 50507 | 51613 | + | GT4 |
| CAZyme | HRGMv2_2279_14 | HRGMv2_2279_14_48 | 51601 | 52671 | + | GT2 |
| TC | HRGMv2_2279_14 | HRGMv2_2279_14_49 | 52799 | 53797 | + | 9.B.183.1.9 |
| CAZyme | HRGMv2_2279_14 | HRGMv2_2279_14_50 | 53815 | 54942 | + | GT4 |
| CAZyme | HRGMv2_2279_14 | HRGMv2_2279_14_51 | 54959 | 55837 | + | GT2 |
Gene ID: HRGMv2_2279_14_47
Type: CAZyme
Location: 50507 - 51613 (+)
Type: CAZyme
Location: 50507 - 51613 (+)
Gene ID: HRGMv2_2279_14_48
Type: CAZyme
Location: 51601 - 52671 (+)
Type: CAZyme
Location: 51601 - 52671 (+)
Gene ID: HRGMv2_2279_14_49
Type: TC
Location: 52799 - 53797 (+)
Type: TC
Location: 52799 - 53797 (+)
Gene ID: HRGMv2_2279_14_50
Type: CAZyme
Location: 53815 - 54942 (+)
Type: CAZyme
Location: 53815 - 54942 (+)
Gene ID: HRGMv2_2279_14_51
Type: CAZyme
Location: 54959 - 55837 (+)
Type: CAZyme
Location: 54959 - 55837 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Species
Hominisplanchenecus sp905214675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.