Cluster: HRGMv2_2279_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2279
- CGC Family ID: CGCFAM_01829
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2279_14 | HRGMv2_2279_14_24 | 27845 | 28543 | + | 8.A.3.2.2 |
| NULL(UNKNOWN) | HRGMv2_2279_14 | HRGMv2_2279_14_25 | 28563 | 28658 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2279_14 | HRGMv2_2279_14_26 | 28655 | 29206 | + | LRR_5 |
| TC | HRGMv2_2279_14 | HRGMv2_2279_14_27 | 29322 | 30761 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_2279_14 | HRGMv2_2279_14_28 | 30758 | 31918 | + | GT4 |
| CAZyme | HRGMv2_2279_14 | HRGMv2_2279_14_29 | 31933 | 33162 | + | GT4 |
Gene ID: HRGMv2_2279_14_24
Type: TC
Location: 27845 - 28543 (+)
Type: TC
Location: 27845 - 28543 (+)
Gene ID: HRGMv2_2279_14_25
Type:
Location: 28563 - 28658 (+)
Type:
Location: 28563 - 28658 (+)
Gene ID: HRGMv2_2279_14_26
Type: pfam
Location: 28655 - 29206 (+)
Type: pfam
Location: 28655 - 29206 (+)
Gene ID: HRGMv2_2279_14_27
Type: TC
Location: 29322 - 30761 (+)
Type: TC
Location: 29322 - 30761 (+)
Gene ID: HRGMv2_2279_14_28
Type: CAZyme
Location: 30758 - 31918 (+)
Type: CAZyme
Location: 30758 - 31918 (+)
Gene ID: HRGMv2_2279_14_29
Type: CAZyme
Location: 31933 - 33162 (+)
Type: CAZyme
Location: 31933 - 33162 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Species
Hominisplanchenecus sp905214675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.