dbCAN Logo

Cluster: HRGMv2_2279_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2279_10 HRGMv2_2279_10_9 7998 8507 + 2.A.87.3.2
CAZyme HRGMv2_2279_10 HRGMv2_2279_10_10 8634 14816 - GH2 | GH2
NULL(UNKNOWN) HRGMv2_2279_10 HRGMv2_2279_10_11 15393 15749 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2279_10 HRGMv2_2279_10_12 15920 16990 - 3.A.1.2.3
TC HRGMv2_2279_10 HRGMv2_2279_10_13 17005 18501 - 3.A.1.2.3
STP HRGMv2_2279_10 HRGMv2_2279_10_14 18635 19930 - Peripla_BP_1 | Peripla_BP_3
STP HRGMv2_2279_10 HRGMv2_2279_10_15 20091 21113 - Peripla_BP_1
TC HRGMv2_2279_10 HRGMv2_2279_10_16 21100 22833 - 9.B.33.1.1
Gene ID: HRGMv2_2279_10_9
Type: TC
Location: 7998 - 8507 (+)
Gene ID: HRGMv2_2279_10_10
Type: CAZyme
Location: 8634 - 14816 (-)
Gene ID: HRGMv2_2279_10_11
Type:
Location: 15393 - 15749 (-)
Gene ID: HRGMv2_2279_10_12
Type: TC
Location: 15920 - 16990 (-)
Gene ID: HRGMv2_2279_10_13
Type: TC
Location: 17005 - 18501 (-)
Gene ID: HRGMv2_2279_10_14
Type: STP
Location: 18635 - 19930 (-)
Gene ID: HRGMv2_2279_10_15
Type: STP
Location: 20091 - 21113 (-)
Gene ID: HRGMv2_2279_10_16
Type: TC
Location: 21100 - 22833 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List