Cluster: HRGMv2_2279_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2279
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2279_1 | HRGMv2_2279_1_14 | 15087 | 16505 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_2279_1 | HRGMv2_2279_1_15 | 16518 | 17279 | + | GT2 |
| pfam | HRGMv2_2279_1 | HRGMv2_2279_1_16 | 17312 | 18481 | + | Glyphos_transf |
| pfam | HRGMv2_2279_1 | HRGMv2_2279_1_17 | 18483 | 19271 | + | ABC2_membrane |
| TC | HRGMv2_2279_1 | HRGMv2_2279_1_18 | 19271 | 20002 | + | 3.A.1.103.4 |
Gene ID: HRGMv2_2279_1_14
Type: TC
Location: 15087 - 16505 (+)
Type: TC
Location: 15087 - 16505 (+)
Gene ID: HRGMv2_2279_1_15
Type: CAZyme
Location: 16518 - 17279 (+)
Type: CAZyme
Location: 16518 - 17279 (+)
Gene ID: HRGMv2_2279_1_16
Type: pfam
Location: 17312 - 18481 (+)
Type: pfam
Location: 17312 - 18481 (+)
Gene ID: HRGMv2_2279_1_17
Type: pfam
Location: 18483 - 19271 (+)
Type: pfam
Location: 18483 - 19271 (+)
Gene ID: HRGMv2_2279_1_18
Type: TC
Location: 19271 - 20002 (+)
Type: TC
Location: 19271 - 20002 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Species
Hominisplanchenecus sp905214675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.