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Cluster: HRGMv2_2277_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2277_1 HRGMv2_2277_1_483 523454 524518 + GT28
STP HRGMv2_2277_1 HRGMv2_2277_1_484 524521 525072 - Sigma70_r4_2
pfam HRGMv2_2277_1 HRGMv2_2277_1_485 525078 525494 - HIT | DcpS_C
TC HRGMv2_2277_1 HRGMv2_2277_1_486 525537 526157 - 9.B.104.1.3
Gene ID: HRGMv2_2277_1_483
Type: CAZyme
Location: 523454 - 524518 (+)
Gene ID: HRGMv2_2277_1_484
Type: STP
Location: 524521 - 525072 (-)
Gene ID: HRGMv2_2277_1_485
Type: pfam
Location: 525078 - 525494 (-)
Gene ID: HRGMv2_2277_1_486
Type: TC
Location: 525537 - 526157 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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