dbCAN Logo

Cluster: HRGMv2_2277_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2277_25 HRGMv2_2277_25_13 14730 16637 + 4.A.1.2.11
CAZyme HRGMv2_2277_25 HRGMv2_2277_25_14 16760 18235 + GH1
TC HRGMv2_2277_25 HRGMv2_2277_25_15 18341 19321 - 3.A.1.2.10
TC HRGMv2_2277_25 HRGMv2_2277_25_16 19334 20461 - 3.A.1.2.10
TC HRGMv2_2277_25 HRGMv2_2277_25_17 20454 21986 - 3.A.1.2.17
pfam HRGMv2_2277_25 HRGMv2_2277_25_18 22122 23405 - Bmp
pfam HRGMv2_2277_25 HRGMv2_2277_25_19 23657 23941 - DUF6809
TC HRGMv2_2277_25 HRGMv2_2277_25_20 24143 26023 - 3.A.25.2.1
TF HRGMv2_2277_25 HRGMv2_2277_25_21 26239 26745 + MarR
TC HRGMv2_2277_25 HRGMv2_2277_25_22 26844 27602 - 3.A.1.3.25
TC HRGMv2_2277_25 HRGMv2_2277_25_23 27592 28284 - 3.A.1.3.20
TC HRGMv2_2277_25 HRGMv2_2277_25_24 28446 29315 - 3.A.1.3.15
Gene ID: HRGMv2_2277_25_13
Type: TC
Location: 14730 - 16637 (+)
Gene ID: HRGMv2_2277_25_14
Type: CAZyme
Location: 16760 - 18235 (+)
Gene ID: HRGMv2_2277_25_15
Type: TC
Location: 18341 - 19321 (-)
Gene ID: HRGMv2_2277_25_16
Type: TC
Location: 19334 - 20461 (-)
Gene ID: HRGMv2_2277_25_17
Type: TC
Location: 20454 - 21986 (-)
Gene ID: HRGMv2_2277_25_18
Type: pfam
Location: 22122 - 23405 (-)
Gene ID: HRGMv2_2277_25_19
Type: pfam
Location: 23657 - 23941 (-)
Gene ID: HRGMv2_2277_25_20
Type: TC
Location: 24143 - 26023 (-)
Gene ID: HRGMv2_2277_25_21
Type: TF
Location: 26239 - 26745 (+)
Gene ID: HRGMv2_2277_25_22
Type: TC
Location: 26844 - 27602 (-)
Gene ID: HRGMv2_2277_25_23
Type: TC
Location: 27592 - 28284 (-)
Gene ID: HRGMv2_2277_25_24
Type: TC
Location: 28446 - 29315 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List