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Cluster: HRGMv2_2277_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2277_21 HRGMv2_2277_21_59 70179 72071 + 8.A.59.2.1
TF HRGMv2_2277_21 HRGMv2_2277_21_60 72049 73617 + HTH_AraC | HTH_AraC
STP HRGMv2_2277_21 HRGMv2_2277_21_61 73697 75106 + SBP_bac_1
TC HRGMv2_2277_21 HRGMv2_2277_21_62 75117 76016 + 3.A.1.1.32
TC HRGMv2_2277_21 HRGMv2_2277_21_63 76006 76836 + 3.A.1.1.18
CAZyme HRGMv2_2277_21 HRGMv2_2277_21_64 76853 79123 + GH2
Gene ID: HRGMv2_2277_21_59
Type: TC
Location: 70179 - 72071 (+)
Gene ID: HRGMv2_2277_21_60
Type: TF
Location: 72049 - 73617 (+)
Gene ID: HRGMv2_2277_21_61
Type: STP
Location: 73697 - 75106 (+)
Gene ID: HRGMv2_2277_21_62
Type: TC
Location: 75117 - 76016 (+)
Gene ID: HRGMv2_2277_21_63
Type: TC
Location: 76006 - 76836 (+)
Gene ID: HRGMv2_2277_21_64
Type: CAZyme
Location: 76853 - 79123 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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