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Cluster: HRGMv2_2277_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2277_20 HRGMv2_2277_20_87 91428 92453 + 9.B.34.1.2
pfam HRGMv2_2277_20 HRGMv2_2277_20_88 92414 93616 - Acyl_transf_3
TF HRGMv2_2277_20 HRGMv2_2277_20_89 93597 94436 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_2277_20 HRGMv2_2277_20_90 94648 97149 + GH31_2
TC HRGMv2_2277_20 HRGMv2_2277_20_91 97219 98244 + 2.A.56.1.2
pfam HRGMv2_2277_20 HRGMv2_2277_20_92 98260 98760 + DctQ
TC HRGMv2_2277_20 HRGMv2_2277_20_93 98760 100061 + 2.A.56.1.5
TC HRGMv2_2277_20 HRGMv2_2277_20_94 100137 100859 - 3.A.1.3.15
TC HRGMv2_2277_20 HRGMv2_2277_20_95 100843 101511 - 3.A.1.3.15
TC HRGMv2_2277_20 HRGMv2_2277_20_96 101537 102442 - 3.A.1.3.15
CAZyme HRGMv2_2277_20 HRGMv2_2277_20_97 102669 103568 + CE4
CAZyme HRGMv2_2277_20 HRGMv2_2277_20_98 103565 104395 + CE4
Gene ID: HRGMv2_2277_20_87
Type: TC
Location: 91428 - 92453 (+)
Gene ID: HRGMv2_2277_20_88
Type: pfam
Location: 92414 - 93616 (-)
Gene ID: HRGMv2_2277_20_89
Type: TF
Location: 93597 - 94436 (-)
Gene ID: HRGMv2_2277_20_90
Type: CAZyme
Location: 94648 - 97149 (+)
Gene ID: HRGMv2_2277_20_91
Type: TC
Location: 97219 - 98244 (+)
Gene ID: HRGMv2_2277_20_92
Type: pfam
Location: 98260 - 98760 (+)
Gene ID: HRGMv2_2277_20_93
Type: TC
Location: 98760 - 100061 (+)
Gene ID: HRGMv2_2277_20_94
Type: TC
Location: 100137 - 100859 (-)
Gene ID: HRGMv2_2277_20_95
Type: TC
Location: 100843 - 101511 (-)
Gene ID: HRGMv2_2277_20_96
Type: TC
Location: 101537 - 102442 (-)
Gene ID: HRGMv2_2277_20_97
Type: CAZyme
Location: 102669 - 103568 (+)
Gene ID: HRGMv2_2277_20_98
Type: CAZyme
Location: 103565 - 104395 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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