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Cluster: HRGMv2_2277_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2277_20 HRGMv2_2277_20_26 26416 27984 - GH28
TC HRGMv2_2277_20 HRGMv2_2277_20_27 28123 28974 - 3.A.1.1.11
TC HRGMv2_2277_20 HRGMv2_2277_20_28 28981 29874 - 3.A.1.1.11
NULL(UNKNOWN) HRGMv2_2277_20 HRGMv2_2277_20_29 29894 30190 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2277_20 HRGMv2_2277_20_30 30344 31696 - 3.A.1.1.11
CAZyme HRGMv2_2277_20 HRGMv2_2277_20_31 32138 33268 + GH105
Gene ID: HRGMv2_2277_20_26
Type: CAZyme
Location: 26416 - 27984 (-)
Gene ID: HRGMv2_2277_20_27
Type: TC
Location: 28123 - 28974 (-)
Gene ID: HRGMv2_2277_20_28
Type: TC
Location: 28981 - 29874 (-)
Gene ID: HRGMv2_2277_20_29
Type:
Location: 29894 - 30190 (-)
Gene ID: HRGMv2_2277_20_30
Type: TC
Location: 30344 - 31696 (-)
Gene ID: HRGMv2_2277_20_31
Type: CAZyme
Location: 32138 - 33268 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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