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Cluster: HRGMv2_2277_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2277_18 HRGMv2_2277_18_15 13889 14983 + GH170
TF HRGMv2_2277_18 HRGMv2_2277_18_16 15075 16994 + HTH_11 | Mga
TC HRGMv2_2277_18 HRGMv2_2277_18_17 17136 17474 + 4.A.3.1.3
TC HRGMv2_2277_18 HRGMv2_2277_18_18 17556 17876 + 4.A.3.2.1
TC HRGMv2_2277_18 HRGMv2_2277_18_19 17945 19279 + 4.A.3.2.2
Gene ID: HRGMv2_2277_18_15
Type: CAZyme
Location: 13889 - 14983 (+)
Gene ID: HRGMv2_2277_18_16
Type: TF
Location: 15075 - 16994 (+)
Gene ID: HRGMv2_2277_18_17
Type: TC
Location: 17136 - 17474 (+)
Gene ID: HRGMv2_2277_18_18
Type: TC
Location: 17556 - 17876 (+)
Gene ID: HRGMv2_2277_18_19
Type: TC
Location: 17945 - 19279 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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