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Cluster: HRGMv2_2277_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2277_17 HRGMv2_2277_17_85 93429 94796 - 2.A.66.1.33
pfam HRGMv2_2277_17 HRGMv2_2277_17_86 94961 96250 + Acyl_transf_3
CAZyme HRGMv2_2277_17 HRGMv2_2277_17_87 96763 98763 - GH31_4
CAZyme HRGMv2_2277_17 HRGMv2_2277_17_88 98767 101232 - GH31_3
TC HRGMv2_2277_17 HRGMv2_2277_17_89 101247 102089 - 3.A.1.1.25
TC HRGMv2_2277_17 HRGMv2_2277_17_90 102102 103004 - 3.A.1.1.7
STP HRGMv2_2277_17 HRGMv2_2277_17_91 103041 104351 - SBP_bac_1
TC HRGMv2_2277_17 HRGMv2_2277_17_92 104556 106361 + 8.A.59.2.1
Gene ID: HRGMv2_2277_17_85
Type: TC
Location: 93429 - 94796 (-)
Gene ID: HRGMv2_2277_17_86
Type: pfam
Location: 94961 - 96250 (+)
Gene ID: HRGMv2_2277_17_87
Type: CAZyme
Location: 96763 - 98763 (-)
Gene ID: HRGMv2_2277_17_88
Type: CAZyme
Location: 98767 - 101232 (-)
Gene ID: HRGMv2_2277_17_89
Type: TC
Location: 101247 - 102089 (-)
Gene ID: HRGMv2_2277_17_90
Type: TC
Location: 102102 - 103004 (-)
Gene ID: HRGMv2_2277_17_91
Type: STP
Location: 103041 - 104351 (-)
Gene ID: HRGMv2_2277_17_92
Type: TC
Location: 104556 - 106361 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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