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Cluster: HRGMv2_2277_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2277_16 HRGMv2_2277_16_116 116449 118140 + GH13_31
TC HRGMv2_2277_16 HRGMv2_2277_16_117 118447 118863 + 4.A.6.1.19
TC HRGMv2_2277_16 HRGMv2_2277_16_118 118940 119425 + 4.A.6.1.19
TC HRGMv2_2277_16 HRGMv2_2277_16_119 119444 120283 + 4.A.6.1.19
TC HRGMv2_2277_16 HRGMv2_2277_16_120 120276 121103 + 4.A.6.1.1
TF HRGMv2_2277_16 HRGMv2_2277_16_121 121238 123955 + HTH_11
CAZyme HRGMv2_2277_16 HRGMv2_2277_16_122 123985 126240 + GH36
Gene ID: HRGMv2_2277_16_116
Type: CAZyme
Location: 116449 - 118140 (+)
Gene ID: HRGMv2_2277_16_117
Type: TC
Location: 118447 - 118863 (+)
Gene ID: HRGMv2_2277_16_118
Type: TC
Location: 118940 - 119425 (+)
Gene ID: HRGMv2_2277_16_119
Type: TC
Location: 119444 - 120283 (+)
Gene ID: HRGMv2_2277_16_120
Type: TC
Location: 120276 - 121103 (+)
Gene ID: HRGMv2_2277_16_121
Type: TF
Location: 121238 - 123955 (+)
Gene ID: HRGMv2_2277_16_122
Type: CAZyme
Location: 123985 - 126240 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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