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Cluster: HRGMv2_2277_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2277_1 HRGMv2_2277_1_134 157694 158809 - GH177
pfam HRGMv2_2277_1 HRGMv2_2277_1_135 158838 159959 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
TC HRGMv2_2277_1 HRGMv2_2277_1_136 159995 160825 - 3.A.1.1.41
TC HRGMv2_2277_1 HRGMv2_2277_1_137 160822 161703 - 3.A.1.1.7
TC HRGMv2_2277_1 HRGMv2_2277_1_138 161779 163176 - 3.A.1.1.48
Gene ID: HRGMv2_2277_1_134
Type: CAZyme
Location: 157694 - 158809 (-)
Gene ID: HRGMv2_2277_1_135
Type: pfam
Location: 158838 - 159959 (-)
Gene ID: HRGMv2_2277_1_136
Type: TC
Location: 159995 - 160825 (-)
Gene ID: HRGMv2_2277_1_137
Type: TC
Location: 160822 - 161703 (-)
Gene ID: HRGMv2_2277_1_138
Type: TC
Location: 161779 - 163176 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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