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Cluster: HRGMv2_2277_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2277_13 HRGMv2_2277_13_75 80955 82355 + 2.A.118.1.5
pfam HRGMv2_2277_13 HRGMv2_2277_13_76 82455 83627 + ELFV_dehydrog | malic | Malic_M
NULL(UNKNOWN) HRGMv2_2277_13 HRGMv2_2277_13_77 83899 84399 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2277_13 HRGMv2_2277_13_78 84387 86840 - GH3
CAZyme HRGMv2_2277_13 HRGMv2_2277_13_79 86900 89758 - GH3
Gene ID: HRGMv2_2277_13_75
Type: TC
Location: 80955 - 82355 (+)
Gene ID: HRGMv2_2277_13_76
Type: pfam
Location: 82455 - 83627 (+)
Gene ID: HRGMv2_2277_13_77
Type:
Location: 83899 - 84399 (-)
Gene ID: HRGMv2_2277_13_78
Type: CAZyme
Location: 84387 - 86840 (-)
Gene ID: HRGMv2_2277_13_79
Type: CAZyme
Location: 86900 - 89758 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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