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Cluster: HRGMv2_2277_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2277_11 HRGMv2_2277_11_44 44592 46439 + 3.A.1.120.6
CAZyme HRGMv2_2277_11 HRGMv2_2277_11_45 46627 48654 + GH13_11
peptidase HRGMv2_2277_11 HRGMv2_2277_11_46 48782 49711 + M20.UPW
TC HRGMv2_2277_11 HRGMv2_2277_11_47 49922 52660 + 3.A.3.2.21
sulfatase HRGMv2_2277_11 HRGMv2_2277_11_48 52783 53679 + S1_56
pfam HRGMv2_2277_11 HRGMv2_2277_11_49 53696 54160 + MGS
CAZyme HRGMv2_2277_11 HRGMv2_2277_11_50 54230 57331 + CBM48 | GH13_9
TC HRGMv2_2277_11 HRGMv2_2277_11_51 57540 59042 + 8.A.59.2.1
TF HRGMv2_2277_11 HRGMv2_2277_11_52 59054 59845 + HTH_AraC | HTH_AraC
TC HRGMv2_2277_11 HRGMv2_2277_11_53 60036 61157 + 2.A.56.1.6
pfam HRGMv2_2277_11 HRGMv2_2277_11_54 61230 61754 + DctQ
TC HRGMv2_2277_11 HRGMv2_2277_11_55 61754 63049 + 2.A.56.1.5
pfam HRGMv2_2277_11 HRGMv2_2277_11_56 63155 63640 + YcxB
TC HRGMv2_2277_11 HRGMv2_2277_11_57 63713 64732 + 2.A.56.1.5
NULL(UNKNOWN) HRGMv2_2277_11 HRGMv2_2277_11_58 64861 66015 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2277_11 HRGMv2_2277_11_59 66226 66804 + HD
CAZyme HRGMv2_2277_11 HRGMv2_2277_11_60 66801 68186 + CE4
Gene ID: HRGMv2_2277_11_44
Type: TC
Location: 44592 - 46439 (+)
Gene ID: HRGMv2_2277_11_45
Type: CAZyme
Location: 46627 - 48654 (+)
Gene ID: HRGMv2_2277_11_46
Type: peptidase
Location: 48782 - 49711 (+)
Gene ID: HRGMv2_2277_11_47
Type: TC
Location: 49922 - 52660 (+)
Gene ID: HRGMv2_2277_11_48
Type: sulfatase
Location: 52783 - 53679 (+)
Gene ID: HRGMv2_2277_11_49
Type: pfam
Location: 53696 - 54160 (+)
Gene ID: HRGMv2_2277_11_50
Type: CAZyme
Location: 54230 - 57331 (+)
Gene ID: HRGMv2_2277_11_51
Type: TC
Location: 57540 - 59042 (+)
Gene ID: HRGMv2_2277_11_52
Type: TF
Location: 59054 - 59845 (+)
Gene ID: HRGMv2_2277_11_53
Type: TC
Location: 60036 - 61157 (+)
Gene ID: HRGMv2_2277_11_54
Type: pfam
Location: 61230 - 61754 (+)
Gene ID: HRGMv2_2277_11_55
Type: TC
Location: 61754 - 63049 (+)
Gene ID: HRGMv2_2277_11_56
Type: pfam
Location: 63155 - 63640 (+)
Gene ID: HRGMv2_2277_11_57
Type: TC
Location: 63713 - 64732 (+)
Gene ID: HRGMv2_2277_11_58
Type:
Location: 64861 - 66015 (-)
Gene ID: HRGMv2_2277_11_59
Type: STP
Location: 66226 - 66804 (+)
Gene ID: HRGMv2_2277_11_60
Type: CAZyme
Location: 66801 - 68186 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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