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Cluster: HRGMv2_2277_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2277_10 HRGMv2_2277_10_15 14716 16119 + 2.A.39.3.6
pfam HRGMv2_2277_10 HRGMv2_2277_10_16 16423 17412 - Choline_bind_1 | Choline_bind_1 | Choline_bind_2 | Choline_bind_3
NULL(UNKNOWN) HRGMv2_2277_10 HRGMv2_2277_10_17 17877 18329 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2277_10 HRGMv2_2277_10_18 18326 18694 + 9.B.55.2.1
TF HRGMv2_2277_10 HRGMv2_2277_10_19 18888 19874 + LacI
TC HRGMv2_2277_10 HRGMv2_2277_10_20 20075 22033 + 4.A.1.2.12
CAZyme HRGMv2_2277_10 HRGMv2_2277_10_21 22061 23509 + GH32
NULL(UNKNOWN) HRGMv2_2277_10 HRGMv2_2277_10_22 23698 24366 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2277_10 HRGMv2_2277_10_23 24505 25926 - 2.A.35.1.2
Gene ID: HRGMv2_2277_10_15
Type: TC
Location: 14716 - 16119 (+)
Gene ID: HRGMv2_2277_10_16
Type: pfam
Location: 16423 - 17412 (-)
Gene ID: HRGMv2_2277_10_17
Type:
Location: 17877 - 18329 (+)
Gene ID: HRGMv2_2277_10_18
Type: TC
Location: 18326 - 18694 (+)
Gene ID: HRGMv2_2277_10_19
Type: TF
Location: 18888 - 19874 (+)
Gene ID: HRGMv2_2277_10_20
Type: TC
Location: 20075 - 22033 (+)
Gene ID: HRGMv2_2277_10_21
Type: CAZyme
Location: 22061 - 23509 (+)
Gene ID: HRGMv2_2277_10_22
Type:
Location: 23698 - 24366 (+)
Gene ID: HRGMv2_2277_10_23
Type: TC
Location: 24505 - 25926 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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