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Cluster: HRGMv2_2277_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2277_8 HRGMv2_2277_8_82 95479 96549 - GT2
NULL(UNKNOWN) HRGMv2_2277_8 HRGMv2_2277_8_83 96537 97616 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2277_8 HRGMv2_2277_8_84 97606 98889 - ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C
TC HRGMv2_2277_8 HRGMv2_2277_8_85 98903 99622 - 9.B.18.1.3
pfam HRGMv2_2277_8 HRGMv2_2277_8_86 99606 100829 - Aminotran_1_2 | DegT_DnrJ_EryC1
pfam HRGMv2_2277_8 HRGMv2_2277_8_87 100877 101506 - NusG
TC HRGMv2_2277_8 HRGMv2_2277_8_88 101534 103585 - 9.B.18.2.1
NULL(UNKNOWN) HRGMv2_2277_8 HRGMv2_2277_8_89 103594 104265 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2277_8 HRGMv2_2277_8_90 104354 105409 - LytR_cpsA_psr
TC HRGMv2_2277_8 HRGMv2_2277_8_91 105439 106146 - 8.A.3.2.3
Gene ID: HRGMv2_2277_8_82
Type: CAZyme
Location: 95479 - 96549 (-)
Gene ID: HRGMv2_2277_8_83
Type:
Location: 96537 - 97616 (-)
Gene ID: HRGMv2_2277_8_84
Type: pfam
Location: 97606 - 98889 (-)
Gene ID: HRGMv2_2277_8_85
Type: TC
Location: 98903 - 99622 (-)
Gene ID: HRGMv2_2277_8_86
Type: pfam
Location: 99606 - 100829 (-)
Gene ID: HRGMv2_2277_8_87
Type: pfam
Location: 100877 - 101506 (-)
Gene ID: HRGMv2_2277_8_88
Type: TC
Location: 101534 - 103585 (-)
Gene ID: HRGMv2_2277_8_89
Type:
Location: 103594 - 104265 (-)
Gene ID: HRGMv2_2277_8_90
Type: pfam
Location: 104354 - 105409 (-)
Gene ID: HRGMv2_2277_8_91
Type: TC
Location: 105439 - 106146 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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