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Cluster: HRGMv2_2277_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2277_7 HRGMv2_2277_7_5 3663 4679 - GH25
pfam HRGMv2_2277_7 HRGMv2_2277_7_6 4808 5542 + Ubie_methyltran | FtsJ | CMAS | TehB | MTS | PrmA | Methyltransf_9 | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC HRGMv2_2277_7 HRGMv2_2277_7_7 5592 7793 + 3.A.7.7.1
Gene ID: HRGMv2_2277_7_5
Type: CAZyme
Location: 3663 - 4679 (-)
Gene ID: HRGMv2_2277_7_6
Type: pfam
Location: 4808 - 5542 (+)
Gene ID: HRGMv2_2277_7_7
Type: TC
Location: 5592 - 7793 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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