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Cluster: HRGMv2_2277_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2277_5 HRGMv2_2277_5_154 165308 166348 - 3.A.1.20.2
pfam HRGMv2_2277_5 HRGMv2_2277_5_155 166338 167153 - BPD_transp_1
pfam HRGMv2_2277_5 HRGMv2_2277_5_156 167187 168053 - BPD_transp_1
TC HRGMv2_2277_5 HRGMv2_2277_5_157 168161 169423 - 3.A.1.19.4
STP HRGMv2_2277_5 HRGMv2_2277_5_158 169610 170521 - Rhodanese | Rhodanese
TC HRGMv2_2277_5 HRGMv2_2277_5_159 170518 170916 - 9.B.27.1.2
pfam HRGMv2_2277_5 HRGMv2_2277_5_160 171007 172017 - APH
CAZyme HRGMv2_2277_5 HRGMv2_2277_5_161 172023 173354 - GT2
Gene ID: HRGMv2_2277_5_154
Type: TC
Location: 165308 - 166348 (-)
Gene ID: HRGMv2_2277_5_155
Type: pfam
Location: 166338 - 167153 (-)
Gene ID: HRGMv2_2277_5_156
Type: pfam
Location: 167187 - 168053 (-)
Gene ID: HRGMv2_2277_5_157
Type: TC
Location: 168161 - 169423 (-)
Gene ID: HRGMv2_2277_5_158
Type: STP
Location: 169610 - 170521 (-)
Gene ID: HRGMv2_2277_5_159
Type: TC
Location: 170518 - 170916 (-)
Gene ID: HRGMv2_2277_5_160
Type: pfam
Location: 171007 - 172017 (-)
Gene ID: HRGMv2_2277_5_161
Type: CAZyme
Location: 172023 - 173354 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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