Cluster: HRGMv2_2277_CGC16
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2277
- CGC Family ID: CGCFAM_04645
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2277_4 | HRGMv2_2277_4_165 | 172834 | 174012 | - | GH88 |
| CAZyme | HRGMv2_2277_4 | HRGMv2_2277_4_166 | 174045 | 176081 | - | PL12_1 |
| TC | HRGMv2_2277_4 | HRGMv2_2277_4_167 | 176130 | 176957 | - | 3.A.1.1.34 |
| TC | HRGMv2_2277_4 | HRGMv2_2277_4_168 | 176970 | 177896 | - | 3.A.1.1.11 |
| STP | HRGMv2_2277_4 | HRGMv2_2277_4_169 | 177988 | 179367 | - | SBP_bac_1 |
| TF | HRGMv2_2277_4 | HRGMv2_2277_4_170 | 179510 | 181168 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2277_4 | HRGMv2_2277_4_171 | 181210 | 182997 | - | 8.A.59.2.1 |
| TC | HRGMv2_2277_4 | HRGMv2_2277_4_172 | 183175 | 184554 | + | 2.A.66.1.32 |
| pfam | HRGMv2_2277_4 | HRGMv2_2277_4_173 | 184662 | 186221 | + | MatE | Polysacc_synt |
| TF | HRGMv2_2277_4 | HRGMv2_2277_4_174 | 186276 | 187001 | - | GntR |
| TC | HRGMv2_2277_4 | HRGMv2_2277_4_175 | 187066 | 187752 | - | 4.B.1.1.2 |
| STP | HRGMv2_2277_4 | HRGMv2_2277_4_176 | 187779 | 188711 | - | PfkB |
| pfam | HRGMv2_2277_4 | HRGMv2_2277_4_177 | 188708 | 189703 | - | ADP_ribosyl_GH |
| TC | HRGMv2_2277_4 | HRGMv2_2277_4_178 | 190095 | 191468 | + | 2.A.66.1.28 |
Gene ID: HRGMv2_2277_4_165
Type: CAZyme
Location: 172834 - 174012 (-)
Type: CAZyme
Location: 172834 - 174012 (-)
Gene ID: HRGMv2_2277_4_166
Type: CAZyme
Location: 174045 - 176081 (-)
Type: CAZyme
Location: 174045 - 176081 (-)
Gene ID: HRGMv2_2277_4_167
Type: TC
Location: 176130 - 176957 (-)
Type: TC
Location: 176130 - 176957 (-)
Gene ID: HRGMv2_2277_4_168
Type: TC
Location: 176970 - 177896 (-)
Type: TC
Location: 176970 - 177896 (-)
Gene ID: HRGMv2_2277_4_169
Type: STP
Location: 177988 - 179367 (-)
Type: STP
Location: 177988 - 179367 (-)
Gene ID: HRGMv2_2277_4_170
Type: TF
Location: 179510 - 181168 (-)
Type: TF
Location: 179510 - 181168 (-)
Gene ID: HRGMv2_2277_4_171
Type: TC
Location: 181210 - 182997 (-)
Type: TC
Location: 181210 - 182997 (-)
Gene ID: HRGMv2_2277_4_172
Type: TC
Location: 183175 - 184554 (+)
Type: TC
Location: 183175 - 184554 (+)
Gene ID: HRGMv2_2277_4_173
Type: pfam
Location: 184662 - 186221 (+)
Type: pfam
Location: 184662 - 186221 (+)
Gene ID: HRGMv2_2277_4_174
Type: TF
Location: 186276 - 187001 (-)
Type: TF
Location: 186276 - 187001 (-)
Gene ID: HRGMv2_2277_4_175
Type: TC
Location: 187066 - 187752 (-)
Type: TC
Location: 187066 - 187752 (-)
Gene ID: HRGMv2_2277_4_176
Type: STP
Location: 187779 - 188711 (-)
Type: STP
Location: 187779 - 188711 (-)
Gene ID: HRGMv2_2277_4_177
Type: pfam
Location: 188708 - 189703 (-)
Type: pfam
Location: 188708 - 189703 (-)
Gene ID: HRGMv2_2277_4_178
Type: TC
Location: 190095 - 191468 (+)
Type: TC
Location: 190095 - 191468 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Enterocloster
Species
Enterocloster sp005845215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.